BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB030C07SP1|AL429191
(987 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig635 1801 0.0
>3x_Contig635
Length = 2061
Score = 1801 bits (906), Expect = 0.0
Identities = 934/941 (99%), Gaps = 4/941 (0%)
Strand = Plus / Plus
Query: 46 gagtattttttcggtctagcagttgkagttgcggttgcaatntggtagtttttatattca 105
||||||||||||||||||||||||| ||||||||||||||| ||| |||||| |||||
Sbjct: 144 gagtattttttcggtctagcagttggagttgcggttgcaat-tgg-agtttt--aattca 199
Query: 106 gctatattkatttgtgtttctctttcacctatctctaatatttatttctgaaagggaatt 165
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 gctatattgatttgtgtttctctttcacctatctctaatatttatttctgaaagggaatt 259
Query: 166 attctgattgtatttaagtctctctttgtttcgttgaatgcatgttctcttacctctgat 225
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 attctgattgtatttaagtctctctttgtttcgttgaatgcatgttctcttacctctgat 319
Query: 226 atcttggaattgagtcgagtgtaaaccatcagatcaatattatattagctaaggatgaat 285
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 atcttggaattgagtcgagtgtaaaccatcagatcaatattatattagctaaggatgaat 379
Query: 286 cccacgatgtatcagaatgattttgtgacgatttcacaggagactctgcgggatggcacg 345
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 cccacgatgtatcagaatgattttgtgacgatttcacaggagactctgcgggatggcacg 439
Query: 346 atgtttaatttgcaattgaaaaggacaccaccggctgataatatggacaatagcaatatt 405
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 atgtttaatttgcaattgaaaaggacaccaccggctgataatatggacaatagcaatatt 499
Query: 406 ggagctaataagtataatcagtggcagtttgattacgaagagcaagaactgagtaatgat 465
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 ggagctaataagtataatcagtggcagtttgattacgaagagcaagaactgagtaatgat 559
Query: 466 ttgaccggaaagaccttggaggatgagatcttcagtttccagcaaggaacttcaatcagg 525
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 ttgaccggaaagaccttggaggatgagatcttcagtttccagcaaggaacttcaatcagg 619
Query: 526 gccatgggcgacgatatcagaaggttatcgataagcgagtaccatcgtgacgatccaatg 585
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 gccatgggcgacgatatcagaaggttatcgataagcgagtaccatcgtgacgatccaatg 679
Query: 586 tactatgagtatgagtttttcaacaaagatgtgatgaacggtagtagtagtagggtaggt 645
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 tactatgagtatgagtttttcaacaaagatgtgatgaacggtagtagtagtagggtaggt 739
Query: 646 aatcttgggggcatgggtagttctaggtccggatctgtgttttctgatgaggataacgag 705
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 aatcttgggggcatgggtagttctaggtccggatctgtgttttctgatgaggataacgag 799
Query: 706 tttgatatcgacatggatcaagagtcaatttttgtcaacgtggggtcaaaatctgtgaac 765
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 tttgatatcgacatggatcaagagtcaatttttgtcaacgtggggtcaaaatctgtgaac 859
Query: 766 gatgcaacgcagacagtaccacatacaacgaattcaatggcattgttgttatctggattg 825
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 860 gatgcaacgcagacagtaccacatacaacgaattcaatggcattgttgttatctggattg 919
Query: 826 gatgaagatgtgtccatgaacttggatttggacgatgagaatgatggtactggtaacagt 885
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 920 gatgaagatgtgtccatgaacttggatttggacgatgagaatgatggtactggtaacagt 979
Query: 886 ggggtgaagaaactattcaaattgaataagatgttcaggaacaacaacaatagagacctc 945
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 980 ggggtgaagaaactattcaaattgaataagatgttcaggaacaacaacaatagagacctc 1039
Query: 946 atatcggatgatgaacctcagcagatcttcaagaagaagta 986
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 1040 atatcggatgatgaacctcagcagatcttcaagaagaagta 1080
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8789
Number of Sequences: 1807
Number of extensions: 8789
Number of successful extensions: 55
Number of sequences better than 1.0e-20: 1
length of query: 987
length of database: 10,358,551
effective HSP length: 16
effective length of query: 971
effective length of database: 10,329,639
effective search space: 10030079469
effective search space used: 10030079469
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.9 bits)